@Adamm
I had these issues a few days ago as well. I had updated to merlin's latest alpha, after which I was having trouble with NTP updating; I tried a factory default; and still had the same problem; Then reverted back to Alpha 2, prior to and after restoring the NTP problem persisted. Skynet was failing to initiate firewall on boot. When trying to load skynet, it fell back to amtm after 5 minutes and pushed an error in the log; NTP connections occur over and over every 30 seconds. It randomly fixed itself without me having to change anything; This is the sequence that is initiated that triggers the fix:
Feb 13 17:07:47 ntp: start NTP update
Apr 22 23:38:53 rc_service: ntp 497:notify_rc restart_diskmon
Apr 22 23:38:53 disk_monitor: Finish
Apr 22 23:38:55 disk_monitor: be idleloading
Saw the following after a long, long wait: