@Adamm, I have the feeling Skynet is blocking DNSCrypt after running it for few hours. Can you replicate it?
I have ABS, OpenVPN, and DNSCrypt installed. The router ran nicely for few days with this configuration.
Then, I have installed Skynet. After running it for few hours (about 4 or so), I've got "dnscrypt-proxy[784]: Unable to retrieve server certificates" and OpenVPN got disconnected, unable to reconnect anymore. Rebooted, and everything works ok again for few hours, then same issue is popping up: DNSCrypt cannot retrieve the certificated, and OpenVPN cannot reconnect anymore..
It could be from DNSCrypt itself, but I doubt, as I have it installed on another router and there is running fine configured with the same DNS servers.
It could be from my external firewall, but I doubt as on the other router everything runs smooth.
(Note: the other router I have is not running Merlin's firmware.)